Use version.txt instead of version.tex

latexmk seemed to have some trouble with it being a tex file

CMakeLists.txt

@@ -1,14 +1,16 @@
 cmake_minimum_required(VERSION 3.18)
 project(
   conflict-set
-  VERSION 0.0.4
+  VERSION 0.0.6
   DESCRIPTION
     "A data structure for optimistic concurrency control on ranges of bitwise-lexicographically-ordered keys."
   HOMEPAGE_URL "https://git.weaselab.dev/weaselab/conflict-set"
   LANGUAGES C CXX)
 set(CMAKE_CXX_STANDARD 20)
 
-file(WRITE ${CMAKE_BINARY_DIR}/version.txt ${PROJECT_VERSION})
+file(WRITE ${CMAKE_CURRENT_BINARY_DIR}/version.txt ${PROJECT_VERSION})
+configure_file(${CMAKE_CURRENT_SOURCE_DIR}/version.txt.in
+               ${CMAKE_CURRENT_SOURCE_DIR}/paper/version.txt)
 
 include(CMakePushCheckState)
 include(CheckCXXCompilerFlag)
@@ -47,7 +49,8 @@ if(HAS_FULL_RELRO)
 endif()
 cmake_pop_check_state()
 
-set(version_script_flags LINKER:--version-script=${CMAKE_SOURCE_DIR}/linker.map)
+set(version_script_flags
+    LINKER:--version-script=${CMAKE_CURRENT_SOURCE_DIR}/linker.map)
 cmake_push_check_state()
 list(APPEND CMAKE_REQUIRED_LINK_OPTIONS ${version_script_flags})
 check_cxx_source_compiles("int main(){}" HAS_VERSION_SCRIPT FAIL_REGEX
@@ -59,7 +62,7 @@ option(USE_SIMD_FALLBACK
 
 # This is encouraged according to
 # https://valgrind.org/docs/manual/manual-core-adv.html#manual-core-adv.clientreq
-include_directories(SYSTEM ${CMAKE_SOURCE_DIR}/third_party/valgrind)
+include_directories(SYSTEM ${CMAKE_CURRENT_SOURCE_DIR}/third_party/valgrind)
 
 add_compile_options($<$<COMPILE_LANGUAGE:CXX>:-Wno-invalid-offsetof>)
 
@@ -106,19 +109,20 @@ add_library(${PROJECT_NAME}-object OBJECT ConflictSet.cpp)
 target_compile_options(${PROJECT_NAME}-object PRIVATE -fno-exceptions
                                                       -fvisibility=hidden)
 target_include_directories(${PROJECT_NAME}-object
-                           PRIVATE ${CMAKE_SOURCE_DIR}/include)
+                           PRIVATE ${CMAKE_CURRENT_SOURCE_DIR}/include)
 
 add_library(${PROJECT_NAME} SHARED $<TARGET_OBJECTS:${PROJECT_NAME}-object>)
 set_target_properties(
   ${PROJECT_NAME} PROPERTIES LIBRARY_OUTPUT_DIRECTORY
-                             "${CMAKE_BINARY_DIR}/radix_tree")
+                             "${CMAKE_CURRENT_BINARY_DIR}/radix_tree")
 if(NOT CMAKE_BUILD_TYPE STREQUAL Debug)
   set_target_properties(${PROJECT_NAME} PROPERTIES LINKER_LANGUAGE C)
 endif()
 
 if(HAS_VERSION_SCRIPT)
-  target_link_options(${PROJECT_NAME} PRIVATE
+  target_link_options(
-                      LINKER:--version-script=${CMAKE_SOURCE_DIR}/linker.map)
+    ${PROJECT_NAME} PRIVATE
+    LINKER:--version-script=${CMAKE_CURRENT_SOURCE_DIR}/linker.map)
 endif()
 
 add_library(${PROJECT_NAME}-static STATIC
@@ -131,7 +135,7 @@ if(APPLE)
   add_custom_command(
     TARGET ${PROJECT_NAME}-static
     PRE_LINK
-    COMMAND ${CMAKE_SOURCE_DIR}/privatize_symbols_macos.sh
+    COMMAND ${CMAKE_CURRENT_SOURCE_DIR}/privatize_symbols_macos.sh
             $<TARGET_OBJECTS:${PROJECT_NAME}-object>)
 else()
   add_custom_command(
@@ -139,21 +143,22 @@ else()
     POST_BUILD
     COMMAND
       ${CMAKE_OBJCOPY}
-      --keep-global-symbols=${CMAKE_SOURCE_DIR}/symbol-exports.txt
+      --keep-global-symbols=${CMAKE_CURRENT_SOURCE_DIR}/symbol-exports.txt
       $<TARGET_FILE:${PROJECT_NAME}-static> || echo
       "Proceeding with all symbols global in static library")
 endif()
 
-set(TEST_FLAGS -Wall -Wextra -Wunreachable-code -Wpedantic -UNDEBUG)
-
 include(CTest)
 
-if(BUILD_TESTING)
+# disable tests if this is being used through e.g. FetchContent
+if(CMAKE_SOURCE_DIR STREQUAL CMAKE_CURRENT_SOURCE_DIR AND BUILD_TESTING)
+
+  set(TEST_FLAGS -Wall -Wextra -Wunreachable-code -Wpedantic -UNDEBUG)
 
   # corpus tests, which are tests curated by libfuzzer. The goal is to get broad
   # coverage with a small number of tests.
 
-  file(GLOB CORPUS_TESTS ${CMAKE_SOURCE_DIR}/corpus/*)
+  file(GLOB CORPUS_TESTS ${CMAKE_CURRENT_SOURCE_DIR}/corpus/*)
 
   # extra testing that relies on shared libraries, which aren't available with
   # wasm
@@ -162,9 +167,11 @@ if(BUILD_TESTING)
     add_library(skip_list SHARED SkipList.cpp)
     target_compile_options(skip_list PRIVATE -fno-exceptions
                                              -fvisibility=hidden)
-    target_include_directories(skip_list PUBLIC ${CMAKE_SOURCE_DIR}/include)
+    target_include_directories(skip_list
-    set_target_properties(skip_list PROPERTIES LIBRARY_OUTPUT_DIRECTORY
+                               PUBLIC ${CMAKE_CURRENT_SOURCE_DIR}/include)
-                                               "${CMAKE_BINARY_DIR}/skip_list")
+    set_target_properties(
+      skip_list PROPERTIES LIBRARY_OUTPUT_DIRECTORY
+                           "${CMAKE_CURRENT_BINARY_DIR}/skip_list")
     set_target_properties(skip_list PROPERTIES OUTPUT_NAME ${PROJECT_NAME})
     set_target_properties(
       skip_list PROPERTIES VERSION ${PROJECT_VERSION} SOVERSION
@@ -175,10 +182,11 @@ if(BUILD_TESTING)
     add_library(hash_table SHARED HashTable.cpp)
     target_compile_options(hash_table PRIVATE -fno-exceptions
                                               -fvisibility=hidden)
-    target_include_directories(hash_table PUBLIC ${CMAKE_SOURCE_DIR}/include)
+    target_include_directories(hash_table
+                               PUBLIC ${CMAKE_CURRENT_SOURCE_DIR}/include)
     set_target_properties(
       hash_table PROPERTIES LIBRARY_OUTPUT_DIRECTORY
-                            "${CMAKE_BINARY_DIR}/hash_table")
+                            "${CMAKE_CURRENT_BINARY_DIR}/hash_table")
     set_target_properties(hash_table PROPERTIES OUTPUT_NAME ${PROJECT_NAME})
     set_target_properties(
       hash_table PROPERTIES VERSION ${PROJECT_VERSION} SOVERSION
@@ -261,14 +269,26 @@ if(BUILD_TESTING)
 
   # scripted tests. Written manually to fill in anything libfuzzer couldn't
   # find.
-  add_executable(script_test ScriptTest.cpp)
+  if(NOT CMAKE_CROSSCOMPILING)
-  target_compile_options(script_test PRIVATE ${TEST_FLAGS})
+    find_package(Python3 REQUIRED COMPONENTS Interpreter)
-  target_link_libraries(script_test PRIVATE ${PROJECT_NAME})
+    set_property(
-  file(GLOB SCRIPT_TESTS ${CMAKE_SOURCE_DIR}/script_tests/*)
+      DIRECTORY
-  foreach(TEST ${SCRIPT_TESTS})
+      APPEND
-    get_filename_component(name ${TEST} NAME)
+      PROPERTY CMAKE_CONFIGURE_DEPENDS
-    add_test(NAME conflict_set_script_${name} COMMAND script_test ${TEST})
+               ${CMAKE_CURRENT_SOURCE_DIR}/test_conflict_set.py)
-  endforeach()
+    execute_process(
+      COMMAND ${Python3_EXECUTABLE}
+              ${CMAKE_CURRENT_SOURCE_DIR}/test_conflict_set.py list
+      OUTPUT_VARIABLE SCRIPT_TESTS)
+    foreach(TEST ${SCRIPT_TESTS})
+      add_test(
+        NAME script_test_${TEST}
+        COMMAND
+          ${Python3_EXECUTABLE}
+          ${CMAKE_CURRENT_SOURCE_DIR}/test_conflict_set.py test ${TEST}
+          --build-dir ${CMAKE_CURRENT_BINARY_DIR})
+    endforeach()
+  endif()
 
   find_program(VALGRIND_EXE valgrind)
   if(VALGRIND_EXE AND NOT CMAKE_CROSSCOMPILING)
@@ -300,25 +320,26 @@ if(BUILD_TESTING)
   # symbol visibility tests
   if(NOT WASM AND NOT CMAKE_BUILD_TYPE STREQUAL Debug)
     if(APPLE)
-      set(symbol_exports ${CMAKE_SOURCE_DIR}/apple-symbol-exports.txt)
+      set(symbol_exports ${CMAKE_CURRENT_SOURCE_DIR}/apple-symbol-exports.txt)
-      set(symbol_imports ${CMAKE_SOURCE_DIR}/apple-symbol-imports.txt)
+      set(symbol_imports ${CMAKE_CURRENT_SOURCE_DIR}/apple-symbol-imports.txt)
     else()
-      set(symbol_exports ${CMAKE_SOURCE_DIR}/symbol-exports.txt)
+      set(symbol_exports ${CMAKE_CURRENT_SOURCE_DIR}/symbol-exports.txt)
       if(CMAKE_SYSTEM_PROCESSOR STREQUAL aarch64)
-        set(symbol_imports ${CMAKE_SOURCE_DIR}/aarch64-symbol-imports.txt)
+        set(symbol_imports
+            ${CMAKE_CURRENT_SOURCE_DIR}/aarch64-symbol-imports.txt)
       else()
-        set(symbol_imports ${CMAKE_SOURCE_DIR}/symbol-imports.txt)
+        set(symbol_imports ${CMAKE_CURRENT_SOURCE_DIR}/symbol-imports.txt)
       endif()
     endif()
     add_test(
       NAME conflict_set_shared_symbols
       COMMAND
-        ${CMAKE_SOURCE_DIR}/test_symbols.sh $<TARGET_FILE:${PROJECT_NAME}>
+        ${CMAKE_CURRENT_SOURCE_DIR}/test_symbols.sh
-        ${symbol_exports} ${symbol_imports})
+        $<TARGET_FILE:${PROJECT_NAME}> ${symbol_exports} ${symbol_imports})
     add_test(
       NAME conflict_set_static_symbols
       COMMAND
-        ${CMAKE_SOURCE_DIR}/test_symbols.sh
+        ${CMAKE_CURRENT_SOURCE_DIR}/test_symbols.sh
         $<TARGET_FILE:${PROJECT_NAME}-static> ${symbol_exports}
         ${symbol_imports})
   endif()
@@ -361,13 +382,13 @@ set(CMAKE_OSX_DEPLOYMENT_TARGET 11.0)
 if(APPLE)
   find_program(PANDOC_EXE pandoc)
   if(PANDOC_EXE)
-    execute_process(COMMAND ${PANDOC_EXE} ${CMAKE_SOURCE_DIR}/README.md -o
+    execute_process(COMMAND ${PANDOC_EXE} ${CMAKE_CURRENT_SOURCE_DIR}/README.md
-                            ${CMAKE_BINARY_DIR}/README.txt)
+                            -o ${CMAKE_CURRENT_BINARY_DIR}/README.txt)
-    set(CPACK_RESOURCE_FILE_README ${CMAKE_BINARY_DIR}/README.txt)
+    set(CPACK_RESOURCE_FILE_README ${CMAKE_CURRENT_BINARY_DIR}/README.txt)
   endif()
-  configure_file(${CMAKE_SOURCE_DIR}/LICENSE ${CMAKE_BINARY_DIR}/LICENSE.txt
+  configure_file(${CMAKE_CURRENT_SOURCE_DIR}/LICENSE
-                 COPYONLY)
+                 ${CMAKE_CURRENT_BINARY_DIR}/LICENSE.txt COPYONLY)
-  set(CPACK_RESOURCE_FILE_LICENSE ${CMAKE_BINARY_DIR}/LICENSE.txt)
+  set(CPACK_RESOURCE_FILE_LICENSE ${CMAKE_CURRENT_BINARY_DIR}/LICENSE.txt)
 endif()
 
 include(CPack)

ConflictSet.cpp

@@ -770,7 +770,7 @@ template <class NodeT> int getChildGeqSimd(NodeT *self, int child) {
 
   // cachegrind says the plain loop is fewer instructions and more mis-predicted
   // branches. Microbenchmark says plain loop is faster. It's written in this
-  // weird "generic" way though in case someday we can use the simd
+  // weird "generic" way though so that someday we can use the simd
   // implementation easily if we want.
   if constexpr (std::is_same_v<NodeT, Node3>) {
     Node3 *n = (Node3 *)self;
@@ -1146,8 +1146,14 @@ void freeAndMakeCapacityAtLeast(Node *&self, int capacity,
 // capacity.
 void maybeDecreaseCapacity(Node *&self, NodeAllocators *allocators,
                            ConflictSet::Impl *impl) {
+
   const int maxCapacity =
       (self->numChildren + int(self->entryPresent)) * (self->partialKeyLen + 1);
+#if DEBUG_VERBOSE && !defined(NDEBUG)
+  fprintf(stderr, "maybeDecreaseCapacity: current: %d, max: %d, key: %s\n",
+          self->getCapacity(), maxCapacity,
+          getSearchPathPrintable(self).c_str());
+#endif
   if (self->getCapacity() <= maxCapacity) {
     return;
   }
@@ -2389,7 +2395,11 @@ Iterator firstGeq(Node *n, const std::span<const uint8_t> key) {
       } else {
         n = nextSibling(n);
         if (n == nullptr) {
-          return {nullptr, 1};
+          //  This line is genuinely unreachable from any entry point of the
+          //  final library, since we can't remove a key without introducing a
+          //  key after it, and the only production caller of firstGeq is for
+          //  resuming the setOldestVersion scan.
+          return {nullptr, 1}; // GCOVR_EXCL_LINE
         }
         goto downLeftSpine;
       }
@@ -2510,6 +2520,10 @@ struct __attribute__((visibility("hidden"))) ConflictSet::Impl {
   }
 
   explicit Impl(int64_t oldestVersion) : oldestVersion(oldestVersion) {
+#if DEBUG_VERBOSE
+    fprintf(stderr, "radix_tree: create\n");
+#endif
+
     // Insert ""
     root = allocators.node0.allocate(0);
     root->numChildren = 0;
@@ -2524,7 +2538,12 @@ struct __attribute__((visibility("hidden"))) ConflictSet::Impl {
     root->entry.pointVersion = oldestVersion;
     root->entry.rangeVersion = oldestVersion;
   }
-  ~Impl() { destroyTree(root); }
+  ~Impl() {
+#if DEBUG_VERBOSE
+    fprintf(stderr, "radix_tree: destroy\n");
+#endif
+    destroyTree(root);
+  }
 
   NodeAllocators allocators;
 
@@ -2578,17 +2597,16 @@ Node *&getInTree(Node *n, ConflictSet::Impl *impl) {
                               : getChildExists(n->parent, n->parentsIndex);
 }
 
-// ==================== END IMPLEMENTATION ====================
+// Internal entry points. Public entry points should just delegate to these
 
-// GCOVR_EXCL_START
+void internal_check(ConflictSet::Impl *impl,
-
+                    const ConflictSet::ReadRange *reads,
-void ConflictSet::check(const ReadRange *reads, Result *results,
+                    ConflictSet::Result *results, int count) {
-                        int count) const {
+  impl->check(reads, results, count);
-  return impl->check(reads, results, count);
 }
-
+void internal_addWrites(ConflictSet::Impl *impl,
-void ConflictSet::addWrites(const WriteRange *writes, int count,
+                        const ConflictSet::WriteRange *writes, int count,
-                            int64_t writeVersion) {
+                        int64_t writeVersion) {
   mallocBytesDelta = 0;
   impl->addWrites(writes, count, writeVersion);
   impl->totalBytes += mallocBytesDelta;
@@ -2599,7 +2617,7 @@ void ConflictSet::addWrites(const WriteRange *writes, int count,
 #endif
 }
 
-void ConflictSet::setOldestVersion(int64_t oldestVersion) {
+void internal_setOldestVersion(ConflictSet::Impl *impl, int64_t oldestVersion) {
   mallocBytesDelta = 0;
   impl->setOldestVersion(oldestVersion);
   impl->totalBytes += mallocBytesDelta;
@@ -2609,19 +2627,47 @@ void ConflictSet::setOldestVersion(int64_t oldestVersion) {
   }
 #endif
 }
+ConflictSet::Impl *internal_create(int64_t oldestVersion) {
+  mallocBytesDelta = 0;
+  auto *result = new (safe_malloc(sizeof(ConflictSet::Impl)))
+      ConflictSet::Impl{oldestVersion};
+  result->totalBytes += mallocBytesDelta;
+  return result;
+}
 
-int64_t ConflictSet::getBytes() const { return impl->totalBytes; }
+void internal_destroy(ConflictSet::Impl *impl) {
+  impl->~Impl();
+  safe_free(impl, sizeof(ConflictSet::Impl));
+}
+
+int64_t internal_getBytes(ConflictSet::Impl *impl) { return impl->totalBytes; }
+
+// ==================== END IMPLEMENTATION ====================
+
+// GCOVR_EXCL_START
+
+void ConflictSet::check(const ReadRange *reads, Result *results,
+                        int count) const {
+  internal_check(impl, reads, results, count);
+}
+
+void ConflictSet::addWrites(const WriteRange *writes, int count,
+                            int64_t writeVersion) {
+  internal_addWrites(impl, writes, count, writeVersion);
+}
+
+void ConflictSet::setOldestVersion(int64_t oldestVersion) {
+  internal_setOldestVersion(impl, oldestVersion);
+}
+
+int64_t ConflictSet::getBytes() const { return internal_getBytes(impl); }
 
 ConflictSet::ConflictSet(int64_t oldestVersion)
-    : impl((mallocBytesDelta = 0,
+    : impl(internal_create(oldestVersion)) {}
-            new(safe_malloc(sizeof(Impl))) Impl{oldestVersion})) {
-  impl->totalBytes += mallocBytesDelta;
-}
 
 ConflictSet::~ConflictSet() {
   if (impl) {
-    impl->~Impl();
+    internal_destroy(impl);
-    safe_free(impl, sizeof(*impl));
   }
 }
 
@@ -2642,40 +2688,27 @@ extern "C" {
 __attribute__((__visibility__("default"))) void
 ConflictSet_check(void *cs, const ConflictSet_ReadRange *reads,
                   ConflictSet_Result *results, int count) {
-  ((ConflictSet::Impl *)cs)->check(reads, results, count);
+  internal_check((ConflictSet::Impl *)cs, reads, results, count);
 }
 __attribute__((__visibility__("default"))) void
 ConflictSet_addWrites(void *cs, const ConflictSet_WriteRange *writes, int count,
                       int64_t writeVersion) {
-  auto *impl = ((ConflictSet::Impl *)cs);
+  internal_addWrites((ConflictSet::Impl *)cs, writes, count, writeVersion);
-  mallocBytesDelta = 0;
-  impl->addWrites(writes, count, writeVersion);
-  impl->totalBytes += mallocBytesDelta;
 }
 __attribute__((__visibility__("default"))) void
 ConflictSet_setOldestVersion(void *cs, int64_t oldestVersion) {
-  auto *impl = ((ConflictSet::Impl *)cs);
+  internal_setOldestVersion((ConflictSet::Impl *)cs, oldestVersion);
-  mallocBytesDelta = 0;
-  impl->setOldestVersion(oldestVersion);
-  impl->totalBytes += mallocBytesDelta;
 }
 __attribute__((__visibility__("default"))) void *
 ConflictSet_create(int64_t oldestVersion) {
-  mallocBytesDelta = 0;
+  return internal_create(oldestVersion);
-  auto *result = new (safe_malloc(sizeof(ConflictSet::Impl)))
-      ConflictSet::Impl{oldestVersion};
-  result->totalBytes += mallocBytesDelta;
-  return result;
 }
 __attribute__((__visibility__("default"))) void ConflictSet_destroy(void *cs) {
-  using Impl = ConflictSet::Impl;
+  internal_destroy((ConflictSet::Impl *)cs);
-  ((Impl *)cs)->~Impl();
-  safe_free(cs, sizeof(Impl));
 }
 __attribute__((__visibility__("default"))) int64_t
 ConflictSet_getBytes(void *cs) {
-  using Impl = ConflictSet::Impl;
+  return internal_getBytes((ConflictSet::Impl *)cs);
-  return ((Impl *)cs)->totalBytes;
 }
 }
 
@@ -2911,10 +2944,6 @@ Iterator firstGeq(Node *n, std::string_view key) {
 
 } // namespace
 
-namespace std {
-void __throw_length_error(const char *) { __builtin_unreachable(); }
-} // namespace std
-
 #if SHOW_MEMORY
 
 int64_t nodeBytes = 0;
@@ -2995,6 +3024,7 @@ void removeKey(Node *n) {
 
 struct __attribute__((visibility("default"))) PeakPrinter {
   ~PeakPrinter() {
+    printf("--- radix_tree ---\n");
     printf("malloc bytes: %g\n", double(mallocBytes));
     printf("Peak malloc bytes: %g\n", double(peakMallocBytes));
     printf("Node bytes: %g\n", double(nodeBytes));

Internal.h

@@ -99,8 +99,7 @@ __attribute__((always_inline)) inline void safe_free(void *p, size_t s) {
   mallocBytesDelta -= s;
 #if SHOW_MEMORY
   mallocBytes -= s;
-  free(p);
+#endif
-#else
 #ifndef NDEBUG
   (char *&)p -= kMallocHeaderSize;
   size_t expected;
@@ -108,7 +107,6 @@ __attribute__((always_inline)) inline void safe_free(void *p, size_t s) {
   assert(s == expected);
 #endif
   free(p);
-#endif
 }
 
 // ==================== BEGIN ARENA IMPL ====================
@@ -257,10 +255,65 @@ template <class T> struct ArenaAlloc {
   void deallocate(T *, size_t) noexcept {}
 };
 
-template <class T> using Vector = std::vector<T, ArenaAlloc<T>>;
+template <class T> struct Vector {
-template <class T> auto vector(Arena &arena) {
+  static_assert(std::is_trivially_destructible_v<T>);
-  return Vector<T>(ArenaAlloc<T>(&arena));
+  static_assert(std::is_trivially_copyable_v<T>);
-}
+
+  explicit Vector(Arena *arena)
+      : arena(arena), t(nullptr), size_(0), capacity(0) {}
+
+  void append(std::span<const T> slice) {
+    if (size_ + int(slice.size()) > capacity) {
+      grow(std::max<int>(size_ + slice.size(), capacity * 2));
+    }
+    if (slice.size() > 0) {
+      memcpy(const_cast<std::remove_const_t<T> *>(t) + size_, slice.data(),
+             slice.size() * sizeof(T));
+    }
+    size_ += slice.size();
+  }
+
+  void push_back(const T &t) { append(std::span<const T>(&t, 1)); }
+
+  T *begin() { return t; }
+  T *end() { return t + size_; }
+  T *data() { return t; }
+  T &back() {
+    assert(size_ > 0);
+    return t[size_ - 1];
+  }
+  T &operator[](int i) {
+    assert(i >= 0 && i < size_);
+    return t[i];
+  }
+
+  void pop_back() {
+    assert(size_ > 0);
+    --size_;
+  }
+
+  int size() const { return size_; }
+
+  operator std::span<const T>() const { return std::span(t, size_); }
+
+private:
+  void grow(int newCapacity) {
+    capacity = newCapacity;
+    auto old = std::span<const T>(*this);
+    t = (T *)new (std::align_val_t(alignof(T)), *arena)
+        uint8_t[capacity * sizeof(T)];
+    size_ = 0;
+    append(old);
+  }
+
+  Arena *arena;
+  T *t;
+  int size_;
+  int capacity;
+};
+
+template <class T> auto vector(Arena &arena) { return Vector<T>(&arena); }
+
 template <class T, class C> using Set = std::set<T, C, ArenaAlloc<T>>;
 template <class T, class C = std::less<T>> auto set(Arena &arena) {
   return Set<T, C>(ArenaAlloc<T>(&arena));
@@ -525,15 +578,18 @@ template <class ConflictSetImpl> struct TestDriver {
   explicit TestDriver(const uint8_t *data, size_t size)
       : arbitrary({data, size}) {}
 
-  int64_t writeVersion = 0;
+  int64_t writeVersion = 100;
   int64_t oldestVersion = 0;
   ConflictSetImpl cs{oldestVersion};
   ReferenceImpl refImpl{oldestVersion};
 
-  constexpr static auto kMaxKeyLen = 8;
+  constexpr static auto kMaxKeySuffixLen = 8;
 
   bool ok = true;
 
+  const int prefixLen = arbitrary.bounded(512);
+  const int prefixByte = arbitrary.randT<uint8_t>();
+
   // Call until it returns true, for "done". Check internal invariants etc
   // between calls to next.
   bool next() {
@@ -544,7 +600,7 @@ template <class ConflictSetImpl> struct TestDriver {
     {
       int numPointWrites = arbitrary.bounded(100);
       int numRangeWrites = arbitrary.bounded(100);
-      int64_t v = ++writeVersion;
+      int64_t v = (writeVersion += arbitrary.bounded(10));
       auto *writes =
           new (arena) ConflictSet::WriteRange[numPointWrites + numRangeWrites];
       auto keys = set<std::string_view>(arena);
@@ -552,9 +608,10 @@ template <class ConflictSetImpl> struct TestDriver {
         if (!arbitrary.hasEntropy()) {
           return true;
         }
-        int keyLen = arbitrary.bounded(kMaxKeyLen);
+        int keyLen = prefixLen + arbitrary.bounded(kMaxKeySuffixLen);
         auto *begin = new (arena) uint8_t[keyLen];
-        arbitrary.randomBytes(begin, keyLen);
+        memset(begin, prefixByte, prefixLen);
+        arbitrary.randomBytes(begin + prefixLen, keyLen - prefixLen);
         keys.insert(std::string_view((const char *)begin, keyLen));
       }
 
@@ -603,8 +660,8 @@ template <class ConflictSetImpl> struct TestDriver {
 
       refImpl.addWrites(writes, numPointWrites + numRangeWrites, v);
 
-      oldestVersion = std::max<int64_t>(writeVersion - arbitrary.bounded(10),
+      oldestVersion =
-                                        oldestVersion);
+          std::min(writeVersion - 10, oldestVersion + arbitrary.bounded(10));
       cs.setOldestVersion(oldestVersion);
       refImpl.setOldestVersion(oldestVersion);
     }
@@ -619,9 +676,10 @@ template <class ConflictSetImpl> struct TestDriver {
         if (!arbitrary.hasEntropy()) {
           return true;
         }
-        int keyLen = arbitrary.bounded(kMaxKeyLen);
+        int keyLen = prefixLen + arbitrary.bounded(kMaxKeySuffixLen);
         auto *begin = new (arena) uint8_t[keyLen];
-        arbitrary.randomBytes(begin, keyLen);
+        memset(begin, prefixByte, prefixLen);
+        arbitrary.randomBytes(begin + prefixLen, keyLen - prefixLen);
         keys.insert(std::string_view((const char *)begin, keyLen));
       }
 

Jenkinsfile

@@ -111,6 +111,9 @@ pipeline {
                 gcovr -f ConflictSet.cpp --cobertura > build/coverage.xml
                 '''
                 cobertura autoUpdateHealth: false, autoUpdateStability: false, coberturaReportFile: 'build/coverage.xml', conditionalCoverageTargets: '70, 0, 0', failUnhealthy: false, failUnstable: false, lineCoverageTargets: '80, 0, 0', maxNumberOfBuilds: 0, methodCoverageTargets: '80, 0, 0', onlyStable: false, sourceEncoding: 'ASCII', zoomCoverageChart: false
+                sh '''
+                gcovr -f ConflictSet.cpp --fail-under-line 100 > /dev/null
+                '''
             }
         }
     }

ScriptTest.cpp

@@ -1,155 +0,0 @@
-#include "Internal.h"
-#include <ConflictSet.h>
-
-#include <chrono>
-#include <cstring>
-#include <fcntl.h>
-#include <sys/mman.h>
-#include <sys/stat.h>
-#include <unistd.h>
-#include <vector>
-
-inline size_t getPageSize() {
-  static size_t kPageSize = sysconf(_SC_PAGESIZE);
-  return kPageSize;
-}
-
-/// Helper for rounding up to page size (or some other alignment)
-constexpr inline size_t rightAlign(size_t offset, size_t alignment) {
-  return offset % alignment == 0 ? offset
-                                 : ((offset / alignment) + 1) * alignment;
-}
-
-using StringView = std::basic_string_view<uint8_t>;
-
-inline StringView operator"" _v(const char *str, size_t size) {
-  return {reinterpret_cast<const uint8_t *>(str), size};
-}
-
-int main(int argc, const char **argv) {
-
-  ConflictSet cs{0};
-  ReferenceImpl ref{0};
-
-  for (int i = 1; i < argc; ++i) {
-    int fd = open(argv[i], O_RDONLY);
-    struct stat st;
-    if (fstat(fd, &st) == -1) {
-      int err = errno;
-      fprintf(stderr, "stat error %s - %s\n", argv[i], strerror(err));
-      fflush(stderr);
-      abort();
-    }
-
-    int64_t size = rightAlign(st.st_size, getPageSize());
-    const uint8_t *begin =
-        (uint8_t *)mmap(0, size, PROT_READ, MAP_PRIVATE, fd, 0);
-    madvise((void *)begin, size, MADV_SEQUENTIAL);
-    auto *const mapOriginal = begin;
-    const auto sizeOriginal = size;
-
-    StringView b;
-    StringView e;
-    int64_t v = 0;
-    int64_t lastWriteVersion = 0;
-    int64_t lastOldestVersion = 0;
-    std::vector<ConflictSet::WriteRange> writeRanges;
-    std::vector<ConflictSet::ReadRange> readRanges;
-    std::vector<ConflictSet::Result> results;
-
-    for (uint8_t *end = (uint8_t *)memchr(begin, '\n', size); end != nullptr;) {
-      StringView line{begin, static_cast<size_t>(end - begin)};
-      size -= end - begin + 1;
-      begin = end + 1;
-      end = (uint8_t *)memchr(begin, '\n', size);
-
-      if (line.starts_with("begin"_v)) {
-        b = line.substr("begin "_v.size(), line.size());
-        printf("b <- %.*s\n", int(b.size()), b.data());
-      } else if (line.starts_with("end"_v)) {
-        e = line.substr("end "_v.size(), line.size());
-        printf("e <- %.*s\n", int(e.size()), e.data());
-      } else if (line.starts_with("version"_v)) {
-        line = line.substr("version "_v.size(), line.size());
-        v = 0;
-        for (auto c : line) {
-          v = v * 10 + int(c) - int('0');
-        }
-        printf("v <- %" PRId64 "\n", v);
-      } else if (line.starts_with("pointread"_v)) {
-        printf("pointread\n");
-        ConflictSet::ReadRange r;
-        r.begin.p = b.data();
-        r.begin.len = b.size();
-        r.end.len = 0;
-        r.readVersion = v;
-        readRanges.push_back(r);
-      } else if (line.starts_with("pointwrite"_v)) {
-        printf("pointwrite\n");
-        assert(writeRanges.empty() ||
-               (writeRanges.back().end.len == 0 ? writeRanges.back().begin
-                                                : writeRanges.back().end) < b);
-        ConflictSet::WriteRange w;
-        w.begin.p = b.data();
-        w.begin.len = b.size();
-        w.end.len = 0;
-        writeRanges.push_back(w);
-      } else if (line.starts_with("rangeread"_v)) {
-        printf("rangeread\n");
-        ConflictSet::ReadRange r;
-        r.begin.p = b.data();
-        r.begin.len = b.size();
-        r.end.p = e.data();
-        r.end.len = e.size();
-        r.readVersion = v;
-        readRanges.push_back(r);
-      } else if (line.starts_with("rangewrite"_v)) {
-        printf("rangewrite\n");
-        assert(b < e);
-        assert(writeRanges.empty() ||
-               (writeRanges.back().end.len == 0 ? writeRanges.back().begin
-                                                : writeRanges.back().end) < b);
-        ConflictSet::WriteRange w;
-        w.begin.p = b.data();
-        w.begin.len = b.size();
-        w.end.p = e.data();
-        w.end.len = e.size();
-        writeRanges.push_back(w);
-      } else if (line.starts_with("check"_v)) {
-        printf("check\n");
-        Arena arena;
-        auto *expected = new (arena) ConflictSet::Result[readRanges.size()];
-        auto *actual = new (arena) ConflictSet::Result[readRanges.size()];
-        ref.check(readRanges.data(), expected, readRanges.size());
-        cs.check(readRanges.data(), actual, readRanges.size());
-        for (int i = 0; i < int(readRanges.size()); ++i) {
-          if (expected[i] != actual[i]) {
-            fprintf(stderr, "Expected %s, got %s at index %d\n",
-                    resultToStr(expected[i]), resultToStr(actual[i]), i);
-            return 1;
-          }
-        }
-        readRanges = {};
-      } else if (line.starts_with("addwrites"_v)) {
-        printf("addwrites\n");
-        assert(v > lastWriteVersion);
-        lastWriteVersion = v;
-        cs.addWrites(writeRanges.data(), writeRanges.size(), v);
-        ref.addWrites(writeRanges.data(), writeRanges.size(), v);
-        writeRanges = {};
-      } else if (line.starts_with("setoldest"_v)) {
-        printf("setoldest\n");
-        assert(v > lastOldestVersion);
-        lastOldestVersion = v;
-        cs.setOldestVersion(v);
-        ref.setOldestVersion(v);
-      } else if (line.empty() || line.starts_with(";"_v)) {
-        // skip
-      } else {
-        printf("Unrecognized line: %.*s\n", int(line.size()), line.data());
-      }
-    }
-    munmap((void *)mapOriginal, sizeOriginal);
-    close(fd);
-  }
-}

SkipList.cpp

@@ -16,6 +16,8 @@
  * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
  * See the License for the specific language governing permissions and
  * limitations under the License.
+ *
+ * This source code is modified to compile outside of FoundationDB
  */
 
 #include "ConflictSet.h"
@@ -268,13 +270,21 @@ public:
   }
 
   explicit SkipList(Version version = 0) {
+#if DEBUG_VERBOSE
+    fprintf(stderr, "skip_list: create\n");
+#endif
     header = Node::create(StringRef(), MaxLevels - 1);
     for (int l = 0; l < MaxLevels; l++) {
       header->setNext(l, nullptr);
       header->setMaxVersion(l, version);
     }
   }
-  ~SkipList() { destroy(); }
+  ~SkipList() {
+#if DEBUG_VERBOSE
+    fprintf(stderr, "skip_list: destroy\n");
+#endif
+    destroy();
+  }
   SkipList(SkipList &&other) noexcept : header(other.header) {
     other.header = nullptr;
   }
@@ -603,6 +613,10 @@ struct __attribute__((visibility("hidden"))) ConflictSet::Impl {
     for (int s = stripes - 1; s >= 0; s--) {
       for (int i = 0; i * 2 < ss; ++i) {
         const auto &w = writes[s * stripeSize / 2 + i];
+#if DEBUG_VERBOSE
+        printf("Write begin: %s\n", printable(w.begin).c_str());
+        fflush(stdout);
+#endif
         values[i * 2] = {w.begin.p, size_t(w.begin.len)};
         values[i * 2 + 1] = w.end.len > 0
                                 ? StringRef{w.end.p, size_t(w.end.len)}
@@ -637,13 +651,16 @@ private:
   SkipList skipList;
 };
 
-void ConflictSet::check(const ReadRange *reads, Result *results,
+// Internal entry points. Public entry points should just delegate to these
-                        int count) const {
+
+void internal_check(ConflictSet::Impl *impl,
+                    const ConflictSet::ReadRange *reads,
+                    ConflictSet::Result *results, int count) {
   impl->check(reads, results, count);
 }
-
+void internal_addWrites(ConflictSet::Impl *impl,
-void ConflictSet::addWrites(const WriteRange *writes, int count,
+                        const ConflictSet::WriteRange *writes, int count,
-                            int64_t writeVersion) {
+                        int64_t writeVersion) {
   mallocBytesDelta = 0;
   impl->addWrites(writes, count, writeVersion);
   impl->totalBytes += mallocBytesDelta;
@@ -654,7 +671,7 @@ void ConflictSet::addWrites(const WriteRange *writes, int count,
 #endif
 }
 
-void ConflictSet::setOldestVersion(int64_t oldestVersion) {
+void internal_setOldestVersion(ConflictSet::Impl *impl, int64_t oldestVersion) {
   mallocBytesDelta = 0;
   impl->setOldestVersion(oldestVersion);
   impl->totalBytes += mallocBytesDelta;
@@ -664,19 +681,43 @@ void ConflictSet::setOldestVersion(int64_t oldestVersion) {
   }
 #endif
 }
+ConflictSet::Impl *internal_create(int64_t oldestVersion) {
+  mallocBytesDelta = 0;
+  auto *result = new (safe_malloc(sizeof(ConflictSet::Impl)))
+      ConflictSet::Impl{oldestVersion};
+  result->totalBytes += mallocBytesDelta;
+  return result;
+}
 
-int64_t ConflictSet::getBytes() const { return impl->totalBytes; }
+void internal_destroy(ConflictSet::Impl *impl) {
+  impl->~Impl();
+  safe_free(impl, sizeof(ConflictSet::Impl));
+}
+
+int64_t internal_getBytes(ConflictSet::Impl *impl) { return impl->totalBytes; }
+
+void ConflictSet::check(const ReadRange *reads, Result *results,
+                        int count) const {
+  internal_check(impl, reads, results, count);
+}
+
+void ConflictSet::addWrites(const WriteRange *writes, int count,
+                            int64_t writeVersion) {
+  internal_addWrites(impl, writes, count, writeVersion);
+}
+
+void ConflictSet::setOldestVersion(int64_t oldestVersion) {
+  internal_setOldestVersion(impl, oldestVersion);
+}
+
+int64_t ConflictSet::getBytes() const { return internal_getBytes(impl); }
 
 ConflictSet::ConflictSet(int64_t oldestVersion)
-    : impl((mallocBytesDelta = 0,
+    : impl(internal_create(oldestVersion)) {}
-            new(safe_malloc(sizeof(Impl))) Impl{oldestVersion})) {
-  impl->totalBytes += mallocBytesDelta;
-}
 
 ConflictSet::~ConflictSet() {
   if (impl) {
-    impl->~Impl();
+    internal_destroy(impl);
-    safe_free(impl, sizeof(Impl));
   }
 }
 
@@ -697,37 +738,34 @@ extern "C" {
 __attribute__((__visibility__("default"))) void
 ConflictSet_check(void *cs, const ConflictSet_ReadRange *reads,
                   ConflictSet_Result *results, int count) {
-  ((ConflictSet::Impl *)cs)->check(reads, results, count);
+  internal_check((ConflictSet::Impl *)cs, reads, results, count);
 }
 __attribute__((__visibility__("default"))) void
 ConflictSet_addWrites(void *cs, const ConflictSet_WriteRange *writes, int count,
                       int64_t writeVersion) {
-  ((ConflictSet::Impl *)cs)->addWrites(writes, count, writeVersion);
+  internal_addWrites((ConflictSet::Impl *)cs, writes, count, writeVersion);
 }
 __attribute__((__visibility__("default"))) void
 ConflictSet_setOldestVersion(void *cs, int64_t oldestVersion) {
-  ((ConflictSet::Impl *)cs)->setOldestVersion(oldestVersion);
+  internal_setOldestVersion((ConflictSet::Impl *)cs, oldestVersion);
 }
 __attribute__((__visibility__("default"))) void *
 ConflictSet_create(int64_t oldestVersion) {
-  return new (safe_malloc(sizeof(ConflictSet::Impl)))
+  return internal_create(oldestVersion);
-      ConflictSet::Impl{oldestVersion};
 }
 __attribute__((__visibility__("default"))) void ConflictSet_destroy(void *cs) {
-  using Impl = ConflictSet::Impl;
+  internal_destroy((ConflictSet::Impl *)cs);
-  ((Impl *)cs)->~Impl();
-  safe_free(cs, sizeof(Impl));
 }
 __attribute__((__visibility__("default"))) int64_t
 ConflictSet_getBytes(void *cs) {
-  using Impl = ConflictSet::Impl;
+  return internal_getBytes((ConflictSet::Impl *)cs);
-  return ((Impl *)cs)->totalBytes;
 }
 }
 
 #if SHOW_MEMORY
 struct __attribute__((visibility("default"))) PeakPrinter {
   ~PeakPrinter() {
+    printf("--- skip_list ---\n");
     printf("malloc bytes: %g\n", double(mallocBytes));
     printf("Peak malloc bytes: %g\n", double(peakMallocBytes));
   }

conflict_set.py

@@ -4,22 +4,6 @@ import os
 
 from typing import Optional
 
-_lib = None
-for f in (
-    os.path.dirname(__file__) + "/build/radix_tree/libconflict-set.so.0",
-    os.path.dirname(__file__) + "/build/radix_tree/libconflict-set.0.dylib",
-):
-    try:
-        _lib = ctypes.cdll.LoadLibrary(f)
-    except:
-        pass
-
-if _lib is None:
-    import sys
-
-    print("Could not find libconflict-set", file=sys.stderr)
-    sys.exit(1)
-
 
 class _Key(ctypes.Structure):
     _fields_ = [("p", ctypes.POINTER(ctypes.c_ubyte)), ("len", ctypes.c_int)]
@@ -37,31 +21,6 @@ class WriteRange(ctypes.Structure):
     _fields_ = [("begin", _Key), ("end", _Key)]
 
 
-_lib.ConflictSet_create.argtypes = (ctypes.c_int64,)
-_lib.ConflictSet_create.restype = ctypes.c_void_p
-
-_lib.ConflictSet_check.argtypes = (
-    ctypes.c_void_p,
-    ctypes.POINTER(ReadRange),
-    ctypes.POINTER(ctypes.c_int),
-    ctypes.c_int,
-)
-
-_lib.ConflictSet_addWrites.argtypes = (
-    ctypes.c_void_p,
-    ctypes.POINTER(WriteRange),
-    ctypes.c_int,
-    ctypes.c_int64,
-)
-
-_lib.ConflictSet_setOldestVersion.argtypes = (ctypes.c_void_p, ctypes.c_int64)
-
-_lib.ConflictSet_destroy.argtypes = (ctypes.c_void_p,)
-
-_lib.ConflictSet_getBytes.argtypes = (ctypes.c_void_p,)
-_lib.ConflictSet_getBytes.restype = ctypes.c_int64
-
-
 class Result(enum.Enum):
     COMMIT = 0
     CONFLICT = 1
@@ -69,58 +28,109 @@ class Result(enum.Enum):
 
 
 def write(begin: bytes, end: Optional[bytes] = None) -> WriteRange:
-    b = (ctypes.c_ubyte * len(begin))()
+    b = (ctypes.c_ubyte * len(begin)).from_buffer(bytearray(begin))
-    b.value = begin
+
     if end is None:
         e = (ctypes.c_ubyte * 0)()
-        e.value = b""
     else:
-        e = (ctypes.c_ubyte * len(end))()
+        e = (ctypes.c_ubyte * len(end)).from_buffer(bytearray(end))
-        e.value = end
     return WriteRange(_Key(b, len(b)), _Key(e, len(e)))
 
 
 def read(version: int, begin: bytes, end: Optional[bytes] = None) -> ReadRange:
-    b = (ctypes.c_ubyte * len(begin))()
+    b = (ctypes.c_ubyte * len(begin)).from_buffer(bytearray(begin))
-    b.value = begin
     if end is None:
         e = (ctypes.c_ubyte * 0)()
-        e.value = b""
     else:
-        e = (ctypes.c_ubyte * len(end))()
+        e = (ctypes.c_ubyte * len(end)).from_buffer(bytearray(end))
-        e.value = end
     return ReadRange(_Key(b, len(b)), _Key(e, len(e)), version)
 
 
 class ConflictSet:
-    def __init__(self, version: int = 0) -> None:
+    def __init__(
-        self.p = _lib.ConflictSet_create(version)
+        self,
+        version: int = 0,
+        build_dir: Optional[str] = None,
+        implementation: Optional[str] = None,
+    ) -> None:
+        self._lib = None
+        if build_dir is None:
+            build_dir = os.path.dirname(__file__) + "/build"
+        if implementation is None:
+            implementation = "radix_tree"
+        for f in (
+            build_dir + "/" + implementation + "/libconflict-set.so.0",
+            os.path.dirname(__file__)
+            + "/build/"
+            + implementation
+            + "/libconflict-set.0.dylib",
+        ):
+            try:
+                self._lib = ctypes.cdll.LoadLibrary(f)
+            except:
+                pass
+
+        if self._lib is None:
+            import sys
+
+            print(
+                "Could not find libconflict-set implementation " + implementation,
+                file=sys.stderr,
+            )
+            sys.exit(1)
+
+        self._lib.ConflictSet_create.argtypes = (ctypes.c_int64,)
+        self._lib.ConflictSet_create.restype = ctypes.c_void_p
+
+        self._lib.ConflictSet_check.argtypes = (
+            ctypes.c_void_p,
+            ctypes.POINTER(ReadRange),
+            ctypes.POINTER(ctypes.c_int),
+            ctypes.c_int,
+        )
+
+        self._lib.ConflictSet_addWrites.argtypes = (
+            ctypes.c_void_p,
+            ctypes.POINTER(WriteRange),
+            ctypes.c_int,
+            ctypes.c_int64,
+        )
+
+        self._lib.ConflictSet_setOldestVersion.argtypes = (
+            ctypes.c_void_p,
+            ctypes.c_int64,
+        )
+
+        self._lib.ConflictSet_destroy.argtypes = (ctypes.c_void_p,)
+
+        self._lib.ConflictSet_getBytes.argtypes = (ctypes.c_void_p,)
+        self._lib.ConflictSet_getBytes.restype = ctypes.c_int64
+
+        self.p = self._lib.ConflictSet_create(version)
 
     def addWrites(self, version: int, *writes: WriteRange):
-        _lib.ConflictSet_addWrites(
+        self._lib.ConflictSet_addWrites(
             self.p, (WriteRange * len(writes))(*writes), len(writes), version
         )
 
     def check(self, *reads: ReadRange) -> list[Result]:
         r = (ctypes.c_int * len(reads))()
-        _lib.ConflictSet_check(self.p, *reads, r, 1)
+        self._lib.ConflictSet_check(self.p, *reads, r, 1)
         return [Result(x) for x in r]
 
     def setOldestVersion(self, version: int) -> None:
-        _lib.ConflictSet_setOldestVersion(self.p, version)
+        self._lib.ConflictSet_setOldestVersion(self.p, version)
 
     def getBytes(self) -> int:
-        return _lib.ConflictSet_getBytes(self.p)
+        return self._lib.ConflictSet_getBytes(self.p)
 
     def __enter__(self):
         return self
 
     def close(self) -> None:
         if self.p is not None:
-            _lib.ConflictSet_destroy(self.p)
+            self._lib.ConflictSet_destroy(self.p)
             self.p = None
 
     def __exit__(self, exception_type, exception_value, exception_traceback):
-        if self.p is not None:
+        self.close()
-            _lib.ConflictSet_destroy(self.p)
-            self.p = None