29 Commits

Author SHA1 Message Date
f6f25cfcce Paper tweaks
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weaselab/conflict-set/pipeline/head This commit looks good
2024-04-22 15:26:00 -07:00
c13dc88ff4 Update corpus 2024-04-22 15:24:55 -07:00
aa5dbb2887 Explicitly allow writeVersion to be non-decreasing
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Tests / Release [gcc,aarch64] total: 868, passed: 868
Tests / Coverage total: 872, passed: 872
weaselab/conflict-set/pipeline/head There was a failure building this commit
Instead of strictly increasing.
2024-04-22 14:15:44 -07:00
ea76e04cda Fix weird-looking url in ubsan reference
Also use the exact html title
2024-04-19 15:19:39 -07:00
452007e079 Change paper title to emphasize usefulness outside fdb
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Tests / Coverage total: 872, passed: 872
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2024-04-19 14:53:31 -07:00
37c75f747b Draft Testing section
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2024-04-19 14:26:47 -07:00
c96d682483 Fix memory error when SHOW_MEMORY = 1
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Tests / Release [gcc,aarch64] total: 868, passed: 868
Tests / Coverage total: 872, passed: 872
weaselab/conflict-set/pipeline/head This commit looks good
2024-04-19 11:28:49 -07:00
6e63fd5126 Add internal entry points, with test coverage
Closes #25
2024-04-19 11:23:25 -07:00
f2678de811 Preserve version in clearConflictSet in fdb patch
Closes #24
2024-04-19 11:00:43 -07:00
4d7ad075b2 Bump version
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Tests / Release [gcc,aarch64] total: 868, passed: 868
Tests / Coverage total: 872, passed: 872
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2024-04-18 14:32:51 -07:00
d2e1863593 Account for every uncovered line in the implementation
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Tests / Release [gcc,aarch64] total: 868, passed: 868
Tests / Coverage total: 872, passed: 872
weaselab/conflict-set/pipeline/head This commit looks good
Closes #23
2024-04-18 12:43:48 -07:00
bf91bca16d Include long common prefix in fuzz test 2024-04-18 12:43:48 -07:00
08ed17f47b Fail jenkins build if not 100% line coverage
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Tests / Release [gcc,aarch64] total: 817, passed: 817
Tests / Coverage total: 820, passed: 820
weaselab/conflict-set/pipeline/head There was a failure building this commit
2024-04-18 12:43:48 -07:00
76a45f16ad Exercise freelist size limiting code
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Tests / Coverage total: 820, passed: 820
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2024-04-17 18:27:01 -07:00
c15d296432 Exercise copyChildrenAndKeyFrom for Node{48,256} to itself
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Tests / Coverage total: 819, passed: 819
weaselab/conflict-set/pipeline/head This commit looks good
2024-04-17 17:13:22 -07:00
64a98c529c Fix conflict_set.py bug, and add full inner words test
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Apparently all bytes were 0
2024-04-17 14:11:26 -07:00
ed1388ed21 Disable script tests when cross compiling
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Tests / Release [gcc,aarch64] total: 817, passed: 817
Tests / Coverage total: 817, passed: 817
weaselab/conflict-set/pipeline/head This commit looks good
2024-04-17 12:25:16 -07:00
309d315956 Add DebugConflictSet, which asserts using skip list as a reference
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Tests / Release [gcc,aarch64] total: 818, failed: 1, passed: 817
Tests / Coverage total: 817, passed: 817
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CC #23
2024-04-17 12:08:39 -07:00
eab2e46a56 Mention that we modified SkipList.cpp 2024-04-17 12:08:33 -07:00
85db1a8786 Allow to choose implementation in python wrapper
And fix a few minor bugs to make the python tests pass for skip_list.

CC #23
2024-04-17 12:08:28 -07:00
717f9d6829 Remove ScriptTest.cpp, replace with test_conflict_set.py
CC #23
2024-04-17 12:08:08 -07:00
fd93300ce8 Tweaks and add more planned sections
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2024-04-16 17:36:29 -07:00
b7e16b31ff Fill out empty subsections
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Tests / Coverage total: 823, passed: 823
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2024-04-16 12:57:57 -07:00
a324d31518 Second pass at "Checking range reads" 2024-04-16 12:14:04 -07:00
fdb05e0e33 First draft of "Checking range reads" subsection
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2024-04-15 17:32:33 -07:00
7c27d4a972 Always target macos 11.0 2024-04-09 14:08:58 -07:00
738de01cb4 Add getBytes to conflict_set.py
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2024-04-08 17:33:51 -07:00
325cab6a95 Target earliest convenient macos version
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2024-04-08 17:16:01 -07:00
0b2821941a Bump version
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Tests / Coverage total: 823, passed: 823
weaselab/conflict-set/pipeline/head This commit looks good
2024-04-08 15:52:06 -07:00
571 changed files with 625 additions and 1174 deletions

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@@ -1,7 +1,7 @@
cmake_minimum_required(VERSION 3.18) cmake_minimum_required(VERSION 3.18)
project( project(
conflict-set conflict-set
VERSION 0.0.3 VERSION 0.0.5
DESCRIPTION DESCRIPTION
"A data structure for optimistic concurrency control on ranges of bitwise-lexicographically-ordered keys." "A data structure for optimistic concurrency control on ranges of bitwise-lexicographically-ordered keys."
HOMEPAGE_URL "https://git.weaselab.dev/weaselab/conflict-set" HOMEPAGE_URL "https://git.weaselab.dev/weaselab/conflict-set"
@@ -261,14 +261,22 @@ if(BUILD_TESTING)
# scripted tests. Written manually to fill in anything libfuzzer couldn't # scripted tests. Written manually to fill in anything libfuzzer couldn't
# find. # find.
add_executable(script_test ScriptTest.cpp) if(NOT CMAKE_CROSSCOMPILING)
target_compile_options(script_test PRIVATE ${TEST_FLAGS}) find_package(Python3 REQUIRED COMPONENTS Interpreter)
target_link_libraries(script_test PRIVATE ${PROJECT_NAME}) set_property(
file(GLOB SCRIPT_TESTS ${CMAKE_SOURCE_DIR}/script_tests/*) DIRECTORY
foreach(TEST ${SCRIPT_TESTS}) APPEND
get_filename_component(name ${TEST} NAME) PROPERTY CMAKE_CONFIGURE_DEPENDS ${CMAKE_SOURCE_DIR}/test_conflict_set.py)
add_test(NAME conflict_set_script_${name} COMMAND script_test ${TEST}) execute_process(
endforeach() COMMAND ${Python3_EXECUTABLE} ${CMAKE_SOURCE_DIR}/test_conflict_set.py
list OUTPUT_VARIABLE SCRIPT_TESTS)
foreach(TEST ${SCRIPT_TESTS})
add_test(
NAME script_test_${TEST}
COMMAND ${Python3_EXECUTABLE} ${CMAKE_SOURCE_DIR}/test_conflict_set.py
test ${TEST} --build-dir ${CMAKE_BINARY_DIR})
endforeach()
endif()
find_program(VALGRIND_EXE valgrind) find_program(VALGRIND_EXE valgrind)
if(VALGRIND_EXE AND NOT CMAKE_CROSSCOMPILING) if(VALGRIND_EXE AND NOT CMAKE_CROSSCOMPILING)
@@ -357,6 +365,7 @@ else()
endif() endif()
# macos # macos
set(CMAKE_OSX_DEPLOYMENT_TARGET 11.0)
if(APPLE) if(APPLE)
find_program(PANDOC_EXE pandoc) find_program(PANDOC_EXE pandoc)
if(PANDOC_EXE) if(PANDOC_EXE)

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@@ -770,7 +770,7 @@ template <class NodeT> int getChildGeqSimd(NodeT *self, int child) {
// cachegrind says the plain loop is fewer instructions and more mis-predicted // cachegrind says the plain loop is fewer instructions and more mis-predicted
// branches. Microbenchmark says plain loop is faster. It's written in this // branches. Microbenchmark says plain loop is faster. It's written in this
// weird "generic" way though in case someday we can use the simd // weird "generic" way though so that someday we can use the simd
// implementation easily if we want. // implementation easily if we want.
if constexpr (std::is_same_v<NodeT, Node3>) { if constexpr (std::is_same_v<NodeT, Node3>) {
Node3 *n = (Node3 *)self; Node3 *n = (Node3 *)self;
@@ -1146,8 +1146,14 @@ void freeAndMakeCapacityAtLeast(Node *&self, int capacity,
// capacity. // capacity.
void maybeDecreaseCapacity(Node *&self, NodeAllocators *allocators, void maybeDecreaseCapacity(Node *&self, NodeAllocators *allocators,
ConflictSet::Impl *impl) { ConflictSet::Impl *impl) {
const int maxCapacity = const int maxCapacity =
(self->numChildren + int(self->entryPresent)) * (self->partialKeyLen + 1); (self->numChildren + int(self->entryPresent)) * (self->partialKeyLen + 1);
#if DEBUG_VERBOSE && !defined(NDEBUG)
fprintf(stderr, "maybeDecreaseCapacity: current: %d, max: %d, key: %s\n",
self->getCapacity(), maxCapacity,
getSearchPathPrintable(self).c_str());
#endif
if (self->getCapacity() <= maxCapacity) { if (self->getCapacity() <= maxCapacity) {
return; return;
} }
@@ -2389,7 +2395,11 @@ Iterator firstGeq(Node *n, const std::span<const uint8_t> key) {
} else { } else {
n = nextSibling(n); n = nextSibling(n);
if (n == nullptr) { if (n == nullptr) {
return {nullptr, 1}; // This line is genuinely unreachable from any entry point of the
// final library, since we can't remove a key without introducing a
// key after it, and the only production caller of firstGeq is for
// resuming the setOldestVersion scan.
return {nullptr, 1}; // GCOVR_EXCL_LINE
} }
goto downLeftSpine; goto downLeftSpine;
} }
@@ -2510,6 +2520,10 @@ struct __attribute__((visibility("hidden"))) ConflictSet::Impl {
} }
explicit Impl(int64_t oldestVersion) : oldestVersion(oldestVersion) { explicit Impl(int64_t oldestVersion) : oldestVersion(oldestVersion) {
#if DEBUG_VERBOSE
fprintf(stderr, "radix_tree: create\n");
#endif
// Insert "" // Insert ""
root = allocators.node0.allocate(0); root = allocators.node0.allocate(0);
root->numChildren = 0; root->numChildren = 0;
@@ -2524,7 +2538,12 @@ struct __attribute__((visibility("hidden"))) ConflictSet::Impl {
root->entry.pointVersion = oldestVersion; root->entry.pointVersion = oldestVersion;
root->entry.rangeVersion = oldestVersion; root->entry.rangeVersion = oldestVersion;
} }
~Impl() { destroyTree(root); } ~Impl() {
#if DEBUG_VERBOSE
fprintf(stderr, "radix_tree: destroy\n");
#endif
destroyTree(root);
}
NodeAllocators allocators; NodeAllocators allocators;
@@ -2578,17 +2597,16 @@ Node *&getInTree(Node *n, ConflictSet::Impl *impl) {
: getChildExists(n->parent, n->parentsIndex); : getChildExists(n->parent, n->parentsIndex);
} }
// ==================== END IMPLEMENTATION ==================== // Internal entry points. Public entry points should just delegate to these
// GCOVR_EXCL_START void internal_check(ConflictSet::Impl *impl,
const ConflictSet::ReadRange *reads,
void ConflictSet::check(const ReadRange *reads, Result *results, ConflictSet::Result *results, int count) {
int count) const { impl->check(reads, results, count);
return impl->check(reads, results, count);
} }
void internal_addWrites(ConflictSet::Impl *impl,
void ConflictSet::addWrites(const WriteRange *writes, int count, const ConflictSet::WriteRange *writes, int count,
int64_t writeVersion) { int64_t writeVersion) {
mallocBytesDelta = 0; mallocBytesDelta = 0;
impl->addWrites(writes, count, writeVersion); impl->addWrites(writes, count, writeVersion);
impl->totalBytes += mallocBytesDelta; impl->totalBytes += mallocBytesDelta;
@@ -2599,7 +2617,7 @@ void ConflictSet::addWrites(const WriteRange *writes, int count,
#endif #endif
} }
void ConflictSet::setOldestVersion(int64_t oldestVersion) { void internal_setOldestVersion(ConflictSet::Impl *impl, int64_t oldestVersion) {
mallocBytesDelta = 0; mallocBytesDelta = 0;
impl->setOldestVersion(oldestVersion); impl->setOldestVersion(oldestVersion);
impl->totalBytes += mallocBytesDelta; impl->totalBytes += mallocBytesDelta;
@@ -2609,19 +2627,47 @@ void ConflictSet::setOldestVersion(int64_t oldestVersion) {
} }
#endif #endif
} }
ConflictSet::Impl *internal_create(int64_t oldestVersion) {
mallocBytesDelta = 0;
auto *result = new (safe_malloc(sizeof(ConflictSet::Impl)))
ConflictSet::Impl{oldestVersion};
result->totalBytes += mallocBytesDelta;
return result;
}
int64_t ConflictSet::getBytes() const { return impl->totalBytes; } void internal_destroy(ConflictSet::Impl *impl) {
impl->~Impl();
safe_free(impl, sizeof(ConflictSet::Impl));
}
int64_t internal_getBytes(ConflictSet::Impl *impl) { return impl->totalBytes; }
// ==================== END IMPLEMENTATION ====================
// GCOVR_EXCL_START
void ConflictSet::check(const ReadRange *reads, Result *results,
int count) const {
internal_check(impl, reads, results, count);
}
void ConflictSet::addWrites(const WriteRange *writes, int count,
int64_t writeVersion) {
internal_addWrites(impl, writes, count, writeVersion);
}
void ConflictSet::setOldestVersion(int64_t oldestVersion) {
internal_setOldestVersion(impl, oldestVersion);
}
int64_t ConflictSet::getBytes() const { return internal_getBytes(impl); }
ConflictSet::ConflictSet(int64_t oldestVersion) ConflictSet::ConflictSet(int64_t oldestVersion)
: impl((mallocBytesDelta = 0, : impl(internal_create(oldestVersion)) {}
new(safe_malloc(sizeof(Impl))) Impl{oldestVersion})) {
impl->totalBytes += mallocBytesDelta;
}
ConflictSet::~ConflictSet() { ConflictSet::~ConflictSet() {
if (impl) { if (impl) {
impl->~Impl(); internal_destroy(impl);
safe_free(impl, sizeof(*impl));
} }
} }
@@ -2642,40 +2688,27 @@ extern "C" {
__attribute__((__visibility__("default"))) void __attribute__((__visibility__("default"))) void
ConflictSet_check(void *cs, const ConflictSet_ReadRange *reads, ConflictSet_check(void *cs, const ConflictSet_ReadRange *reads,
ConflictSet_Result *results, int count) { ConflictSet_Result *results, int count) {
((ConflictSet::Impl *)cs)->check(reads, results, count); internal_check((ConflictSet::Impl *)cs, reads, results, count);
} }
__attribute__((__visibility__("default"))) void __attribute__((__visibility__("default"))) void
ConflictSet_addWrites(void *cs, const ConflictSet_WriteRange *writes, int count, ConflictSet_addWrites(void *cs, const ConflictSet_WriteRange *writes, int count,
int64_t writeVersion) { int64_t writeVersion) {
auto *impl = ((ConflictSet::Impl *)cs); internal_addWrites((ConflictSet::Impl *)cs, writes, count, writeVersion);
mallocBytesDelta = 0;
impl->addWrites(writes, count, writeVersion);
impl->totalBytes += mallocBytesDelta;
} }
__attribute__((__visibility__("default"))) void __attribute__((__visibility__("default"))) void
ConflictSet_setOldestVersion(void *cs, int64_t oldestVersion) { ConflictSet_setOldestVersion(void *cs, int64_t oldestVersion) {
auto *impl = ((ConflictSet::Impl *)cs); internal_setOldestVersion((ConflictSet::Impl *)cs, oldestVersion);
mallocBytesDelta = 0;
impl->setOldestVersion(oldestVersion);
impl->totalBytes += mallocBytesDelta;
} }
__attribute__((__visibility__("default"))) void * __attribute__((__visibility__("default"))) void *
ConflictSet_create(int64_t oldestVersion) { ConflictSet_create(int64_t oldestVersion) {
mallocBytesDelta = 0; return internal_create(oldestVersion);
auto *result = new (safe_malloc(sizeof(ConflictSet::Impl)))
ConflictSet::Impl{oldestVersion};
result->totalBytes += mallocBytesDelta;
return result;
} }
__attribute__((__visibility__("default"))) void ConflictSet_destroy(void *cs) { __attribute__((__visibility__("default"))) void ConflictSet_destroy(void *cs) {
using Impl = ConflictSet::Impl; internal_destroy((ConflictSet::Impl *)cs);
((Impl *)cs)->~Impl();
safe_free(cs, sizeof(Impl));
} }
__attribute__((__visibility__("default"))) int64_t __attribute__((__visibility__("default"))) int64_t
ConflictSet_getBytes(void *cs) { ConflictSet_getBytes(void *cs) {
using Impl = ConflictSet::Impl; return internal_getBytes((ConflictSet::Impl *)cs);
return ((Impl *)cs)->totalBytes;
} }
} }
@@ -2995,6 +3028,7 @@ void removeKey(Node *n) {
struct __attribute__((visibility("default"))) PeakPrinter { struct __attribute__((visibility("default"))) PeakPrinter {
~PeakPrinter() { ~PeakPrinter() {
printf("--- radix_tree ---\n");
printf("malloc bytes: %g\n", double(mallocBytes)); printf("malloc bytes: %g\n", double(mallocBytes));
printf("Peak malloc bytes: %g\n", double(peakMallocBytes)); printf("Peak malloc bytes: %g\n", double(peakMallocBytes));
printf("Node bytes: %g\n", double(nodeBytes)); printf("Node bytes: %g\n", double(nodeBytes));

View File

@@ -99,8 +99,7 @@ __attribute__((always_inline)) inline void safe_free(void *p, size_t s) {
mallocBytesDelta -= s; mallocBytesDelta -= s;
#if SHOW_MEMORY #if SHOW_MEMORY
mallocBytes -= s; mallocBytes -= s;
free(p); #endif
#else
#ifndef NDEBUG #ifndef NDEBUG
(char *&)p -= kMallocHeaderSize; (char *&)p -= kMallocHeaderSize;
size_t expected; size_t expected;
@@ -108,7 +107,6 @@ __attribute__((always_inline)) inline void safe_free(void *p, size_t s) {
assert(s == expected); assert(s == expected);
#endif #endif
free(p); free(p);
#endif
} }
// ==================== BEGIN ARENA IMPL ==================== // ==================== BEGIN ARENA IMPL ====================
@@ -525,15 +523,18 @@ template <class ConflictSetImpl> struct TestDriver {
explicit TestDriver(const uint8_t *data, size_t size) explicit TestDriver(const uint8_t *data, size_t size)
: arbitrary({data, size}) {} : arbitrary({data, size}) {}
int64_t writeVersion = 0; int64_t writeVersion = 100;
int64_t oldestVersion = 0; int64_t oldestVersion = 0;
ConflictSetImpl cs{oldestVersion}; ConflictSetImpl cs{oldestVersion};
ReferenceImpl refImpl{oldestVersion}; ReferenceImpl refImpl{oldestVersion};
constexpr static auto kMaxKeyLen = 8; constexpr static auto kMaxKeySuffixLen = 8;
bool ok = true; bool ok = true;
const int prefixLen = arbitrary.bounded(512);
const int prefixByte = arbitrary.randT<uint8_t>();
// Call until it returns true, for "done". Check internal invariants etc // Call until it returns true, for "done". Check internal invariants etc
// between calls to next. // between calls to next.
bool next() { bool next() {
@@ -544,7 +545,7 @@ template <class ConflictSetImpl> struct TestDriver {
{ {
int numPointWrites = arbitrary.bounded(100); int numPointWrites = arbitrary.bounded(100);
int numRangeWrites = arbitrary.bounded(100); int numRangeWrites = arbitrary.bounded(100);
int64_t v = ++writeVersion; int64_t v = (writeVersion += arbitrary.bounded(10));
auto *writes = auto *writes =
new (arena) ConflictSet::WriteRange[numPointWrites + numRangeWrites]; new (arena) ConflictSet::WriteRange[numPointWrites + numRangeWrites];
auto keys = set<std::string_view>(arena); auto keys = set<std::string_view>(arena);
@@ -552,9 +553,10 @@ template <class ConflictSetImpl> struct TestDriver {
if (!arbitrary.hasEntropy()) { if (!arbitrary.hasEntropy()) {
return true; return true;
} }
int keyLen = arbitrary.bounded(kMaxKeyLen); int keyLen = prefixLen + arbitrary.bounded(kMaxKeySuffixLen);
auto *begin = new (arena) uint8_t[keyLen]; auto *begin = new (arena) uint8_t[keyLen];
arbitrary.randomBytes(begin, keyLen); memset(begin, prefixByte, prefixLen);
arbitrary.randomBytes(begin + prefixLen, keyLen - prefixLen);
keys.insert(std::string_view((const char *)begin, keyLen)); keys.insert(std::string_view((const char *)begin, keyLen));
} }
@@ -603,8 +605,8 @@ template <class ConflictSetImpl> struct TestDriver {
refImpl.addWrites(writes, numPointWrites + numRangeWrites, v); refImpl.addWrites(writes, numPointWrites + numRangeWrites, v);
oldestVersion = std::max<int64_t>(writeVersion - arbitrary.bounded(10), oldestVersion =
oldestVersion); std::min(writeVersion - 10, oldestVersion + arbitrary.bounded(10));
cs.setOldestVersion(oldestVersion); cs.setOldestVersion(oldestVersion);
refImpl.setOldestVersion(oldestVersion); refImpl.setOldestVersion(oldestVersion);
} }
@@ -619,9 +621,10 @@ template <class ConflictSetImpl> struct TestDriver {
if (!arbitrary.hasEntropy()) { if (!arbitrary.hasEntropy()) {
return true; return true;
} }
int keyLen = arbitrary.bounded(kMaxKeyLen); int keyLen = prefixLen + arbitrary.bounded(kMaxKeySuffixLen);
auto *begin = new (arena) uint8_t[keyLen]; auto *begin = new (arena) uint8_t[keyLen];
arbitrary.randomBytes(begin, keyLen); memset(begin, prefixByte, prefixLen);
arbitrary.randomBytes(begin + prefixLen, keyLen - prefixLen);
keys.insert(std::string_view((const char *)begin, keyLen)); keys.insert(std::string_view((const char *)begin, keyLen));
} }

3
Jenkinsfile vendored
View File

@@ -111,6 +111,9 @@ pipeline {
gcovr -f ConflictSet.cpp --cobertura > build/coverage.xml gcovr -f ConflictSet.cpp --cobertura > build/coverage.xml
''' '''
cobertura autoUpdateHealth: false, autoUpdateStability: false, coberturaReportFile: 'build/coverage.xml', conditionalCoverageTargets: '70, 0, 0', failUnhealthy: false, failUnstable: false, lineCoverageTargets: '80, 0, 0', maxNumberOfBuilds: 0, methodCoverageTargets: '80, 0, 0', onlyStable: false, sourceEncoding: 'ASCII', zoomCoverageChart: false cobertura autoUpdateHealth: false, autoUpdateStability: false, coberturaReportFile: 'build/coverage.xml', conditionalCoverageTargets: '70, 0, 0', failUnhealthy: false, failUnstable: false, lineCoverageTargets: '80, 0, 0', maxNumberOfBuilds: 0, methodCoverageTargets: '80, 0, 0', onlyStable: false, sourceEncoding: 'ASCII', zoomCoverageChart: false
sh '''
gcovr -f ConflictSet.cpp --fail-under-line 100 > /dev/null
'''
} }
} }
} }

View File

@@ -1,155 +0,0 @@
#include "Internal.h"
#include <ConflictSet.h>
#include <chrono>
#include <cstring>
#include <fcntl.h>
#include <sys/mman.h>
#include <sys/stat.h>
#include <unistd.h>
#include <vector>
inline size_t getPageSize() {
static size_t kPageSize = sysconf(_SC_PAGESIZE);
return kPageSize;
}
/// Helper for rounding up to page size (or some other alignment)
constexpr inline size_t rightAlign(size_t offset, size_t alignment) {
return offset % alignment == 0 ? offset
: ((offset / alignment) + 1) * alignment;
}
using StringView = std::basic_string_view<uint8_t>;
inline StringView operator"" _v(const char *str, size_t size) {
return {reinterpret_cast<const uint8_t *>(str), size};
}
int main(int argc, const char **argv) {
ConflictSet cs{0};
ReferenceImpl ref{0};
for (int i = 1; i < argc; ++i) {
int fd = open(argv[i], O_RDONLY);
struct stat st;
if (fstat(fd, &st) == -1) {
int err = errno;
fprintf(stderr, "stat error %s - %s\n", argv[i], strerror(err));
fflush(stderr);
abort();
}
int64_t size = rightAlign(st.st_size, getPageSize());
const uint8_t *begin =
(uint8_t *)mmap(0, size, PROT_READ, MAP_PRIVATE, fd, 0);
madvise((void *)begin, size, MADV_SEQUENTIAL);
auto *const mapOriginal = begin;
const auto sizeOriginal = size;
StringView b;
StringView e;
int64_t v = 0;
int64_t lastWriteVersion = 0;
int64_t lastOldestVersion = 0;
std::vector<ConflictSet::WriteRange> writeRanges;
std::vector<ConflictSet::ReadRange> readRanges;
std::vector<ConflictSet::Result> results;
for (uint8_t *end = (uint8_t *)memchr(begin, '\n', size); end != nullptr;) {
StringView line{begin, static_cast<size_t>(end - begin)};
size -= end - begin + 1;
begin = end + 1;
end = (uint8_t *)memchr(begin, '\n', size);
if (line.starts_with("begin"_v)) {
b = line.substr("begin "_v.size(), line.size());
printf("b <- %.*s\n", int(b.size()), b.data());
} else if (line.starts_with("end"_v)) {
e = line.substr("end "_v.size(), line.size());
printf("e <- %.*s\n", int(e.size()), e.data());
} else if (line.starts_with("version"_v)) {
line = line.substr("version "_v.size(), line.size());
v = 0;
for (auto c : line) {
v = v * 10 + int(c) - int('0');
}
printf("v <- %" PRId64 "\n", v);
} else if (line.starts_with("pointread"_v)) {
printf("pointread\n");
ConflictSet::ReadRange r;
r.begin.p = b.data();
r.begin.len = b.size();
r.end.len = 0;
r.readVersion = v;
readRanges.push_back(r);
} else if (line.starts_with("pointwrite"_v)) {
printf("pointwrite\n");
assert(writeRanges.empty() ||
(writeRanges.back().end.len == 0 ? writeRanges.back().begin
: writeRanges.back().end) < b);
ConflictSet::WriteRange w;
w.begin.p = b.data();
w.begin.len = b.size();
w.end.len = 0;
writeRanges.push_back(w);
} else if (line.starts_with("rangeread"_v)) {
printf("rangeread\n");
ConflictSet::ReadRange r;
r.begin.p = b.data();
r.begin.len = b.size();
r.end.p = e.data();
r.end.len = e.size();
r.readVersion = v;
readRanges.push_back(r);
} else if (line.starts_with("rangewrite"_v)) {
printf("rangewrite\n");
assert(b < e);
assert(writeRanges.empty() ||
(writeRanges.back().end.len == 0 ? writeRanges.back().begin
: writeRanges.back().end) < b);
ConflictSet::WriteRange w;
w.begin.p = b.data();
w.begin.len = b.size();
w.end.p = e.data();
w.end.len = e.size();
writeRanges.push_back(w);
} else if (line.starts_with("check"_v)) {
printf("check\n");
Arena arena;
auto *expected = new (arena) ConflictSet::Result[readRanges.size()];
auto *actual = new (arena) ConflictSet::Result[readRanges.size()];
ref.check(readRanges.data(), expected, readRanges.size());
cs.check(readRanges.data(), actual, readRanges.size());
for (int i = 0; i < int(readRanges.size()); ++i) {
if (expected[i] != actual[i]) {
fprintf(stderr, "Expected %s, got %s at index %d\n",
resultToStr(expected[i]), resultToStr(actual[i]), i);
return 1;
}
}
readRanges = {};
} else if (line.starts_with("addwrites"_v)) {
printf("addwrites\n");
assert(v > lastWriteVersion);
lastWriteVersion = v;
cs.addWrites(writeRanges.data(), writeRanges.size(), v);
ref.addWrites(writeRanges.data(), writeRanges.size(), v);
writeRanges = {};
} else if (line.starts_with("setoldest"_v)) {
printf("setoldest\n");
assert(v > lastOldestVersion);
lastOldestVersion = v;
cs.setOldestVersion(v);
ref.setOldestVersion(v);
} else if (line.empty() || line.starts_with(";"_v)) {
// skip
} else {
printf("Unrecognized line: %.*s\n", int(line.size()), line.data());
}
}
munmap((void *)mapOriginal, sizeOriginal);
close(fd);
}
}

View File

@@ -16,6 +16,8 @@
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and * See the License for the specific language governing permissions and
* limitations under the License. * limitations under the License.
*
* This source code is modified to compile outside of FoundationDB
*/ */
#include "ConflictSet.h" #include "ConflictSet.h"
@@ -268,13 +270,21 @@ public:
} }
explicit SkipList(Version version = 0) { explicit SkipList(Version version = 0) {
#if DEBUG_VERBOSE
fprintf(stderr, "skip_list: create\n");
#endif
header = Node::create(StringRef(), MaxLevels - 1); header = Node::create(StringRef(), MaxLevels - 1);
for (int l = 0; l < MaxLevels; l++) { for (int l = 0; l < MaxLevels; l++) {
header->setNext(l, nullptr); header->setNext(l, nullptr);
header->setMaxVersion(l, version); header->setMaxVersion(l, version);
} }
} }
~SkipList() { destroy(); } ~SkipList() {
#if DEBUG_VERBOSE
fprintf(stderr, "skip_list: destroy\n");
#endif
destroy();
}
SkipList(SkipList &&other) noexcept : header(other.header) { SkipList(SkipList &&other) noexcept : header(other.header) {
other.header = nullptr; other.header = nullptr;
} }
@@ -603,6 +613,10 @@ struct __attribute__((visibility("hidden"))) ConflictSet::Impl {
for (int s = stripes - 1; s >= 0; s--) { for (int s = stripes - 1; s >= 0; s--) {
for (int i = 0; i * 2 < ss; ++i) { for (int i = 0; i * 2 < ss; ++i) {
const auto &w = writes[s * stripeSize / 2 + i]; const auto &w = writes[s * stripeSize / 2 + i];
#if DEBUG_VERBOSE
printf("Write begin: %s\n", printable(w.begin).c_str());
fflush(stdout);
#endif
values[i * 2] = {w.begin.p, size_t(w.begin.len)}; values[i * 2] = {w.begin.p, size_t(w.begin.len)};
values[i * 2 + 1] = w.end.len > 0 values[i * 2 + 1] = w.end.len > 0
? StringRef{w.end.p, size_t(w.end.len)} ? StringRef{w.end.p, size_t(w.end.len)}
@@ -637,13 +651,16 @@ private:
SkipList skipList; SkipList skipList;
}; };
void ConflictSet::check(const ReadRange *reads, Result *results, // Internal entry points. Public entry points should just delegate to these
int count) const {
void internal_check(ConflictSet::Impl *impl,
const ConflictSet::ReadRange *reads,
ConflictSet::Result *results, int count) {
impl->check(reads, results, count); impl->check(reads, results, count);
} }
void internal_addWrites(ConflictSet::Impl *impl,
void ConflictSet::addWrites(const WriteRange *writes, int count, const ConflictSet::WriteRange *writes, int count,
int64_t writeVersion) { int64_t writeVersion) {
mallocBytesDelta = 0; mallocBytesDelta = 0;
impl->addWrites(writes, count, writeVersion); impl->addWrites(writes, count, writeVersion);
impl->totalBytes += mallocBytesDelta; impl->totalBytes += mallocBytesDelta;
@@ -654,7 +671,7 @@ void ConflictSet::addWrites(const WriteRange *writes, int count,
#endif #endif
} }
void ConflictSet::setOldestVersion(int64_t oldestVersion) { void internal_setOldestVersion(ConflictSet::Impl *impl, int64_t oldestVersion) {
mallocBytesDelta = 0; mallocBytesDelta = 0;
impl->setOldestVersion(oldestVersion); impl->setOldestVersion(oldestVersion);
impl->totalBytes += mallocBytesDelta; impl->totalBytes += mallocBytesDelta;
@@ -664,19 +681,43 @@ void ConflictSet::setOldestVersion(int64_t oldestVersion) {
} }
#endif #endif
} }
ConflictSet::Impl *internal_create(int64_t oldestVersion) {
mallocBytesDelta = 0;
auto *result = new (safe_malloc(sizeof(ConflictSet::Impl)))
ConflictSet::Impl{oldestVersion};
result->totalBytes += mallocBytesDelta;
return result;
}
int64_t ConflictSet::getBytes() const { return impl->totalBytes; } void internal_destroy(ConflictSet::Impl *impl) {
impl->~Impl();
safe_free(impl, sizeof(ConflictSet::Impl));
}
int64_t internal_getBytes(ConflictSet::Impl *impl) { return impl->totalBytes; }
void ConflictSet::check(const ReadRange *reads, Result *results,
int count) const {
internal_check(impl, reads, results, count);
}
void ConflictSet::addWrites(const WriteRange *writes, int count,
int64_t writeVersion) {
internal_addWrites(impl, writes, count, writeVersion);
}
void ConflictSet::setOldestVersion(int64_t oldestVersion) {
internal_setOldestVersion(impl, oldestVersion);
}
int64_t ConflictSet::getBytes() const { return internal_getBytes(impl); }
ConflictSet::ConflictSet(int64_t oldestVersion) ConflictSet::ConflictSet(int64_t oldestVersion)
: impl((mallocBytesDelta = 0, : impl(internal_create(oldestVersion)) {}
new(safe_malloc(sizeof(Impl))) Impl{oldestVersion})) {
impl->totalBytes += mallocBytesDelta;
}
ConflictSet::~ConflictSet() { ConflictSet::~ConflictSet() {
if (impl) { if (impl) {
impl->~Impl(); internal_destroy(impl);
safe_free(impl, sizeof(Impl));
} }
} }
@@ -697,37 +738,34 @@ extern "C" {
__attribute__((__visibility__("default"))) void __attribute__((__visibility__("default"))) void
ConflictSet_check(void *cs, const ConflictSet_ReadRange *reads, ConflictSet_check(void *cs, const ConflictSet_ReadRange *reads,
ConflictSet_Result *results, int count) { ConflictSet_Result *results, int count) {
((ConflictSet::Impl *)cs)->check(reads, results, count); internal_check((ConflictSet::Impl *)cs, reads, results, count);
} }
__attribute__((__visibility__("default"))) void __attribute__((__visibility__("default"))) void
ConflictSet_addWrites(void *cs, const ConflictSet_WriteRange *writes, int count, ConflictSet_addWrites(void *cs, const ConflictSet_WriteRange *writes, int count,
int64_t writeVersion) { int64_t writeVersion) {
((ConflictSet::Impl *)cs)->addWrites(writes, count, writeVersion); internal_addWrites((ConflictSet::Impl *)cs, writes, count, writeVersion);
} }
__attribute__((__visibility__("default"))) void __attribute__((__visibility__("default"))) void
ConflictSet_setOldestVersion(void *cs, int64_t oldestVersion) { ConflictSet_setOldestVersion(void *cs, int64_t oldestVersion) {
((ConflictSet::Impl *)cs)->setOldestVersion(oldestVersion); internal_setOldestVersion((ConflictSet::Impl *)cs, oldestVersion);
} }
__attribute__((__visibility__("default"))) void * __attribute__((__visibility__("default"))) void *
ConflictSet_create(int64_t oldestVersion) { ConflictSet_create(int64_t oldestVersion) {
return new (safe_malloc(sizeof(ConflictSet::Impl))) return internal_create(oldestVersion);
ConflictSet::Impl{oldestVersion};
} }
__attribute__((__visibility__("default"))) void ConflictSet_destroy(void *cs) { __attribute__((__visibility__("default"))) void ConflictSet_destroy(void *cs) {
using Impl = ConflictSet::Impl; internal_destroy((ConflictSet::Impl *)cs);
((Impl *)cs)->~Impl();
safe_free(cs, sizeof(Impl));
} }
__attribute__((__visibility__("default"))) int64_t __attribute__((__visibility__("default"))) int64_t
ConflictSet_getBytes(void *cs) { ConflictSet_getBytes(void *cs) {
using Impl = ConflictSet::Impl; return internal_getBytes((ConflictSet::Impl *)cs);
return ((Impl *)cs)->totalBytes;
} }
} }
#if SHOW_MEMORY #if SHOW_MEMORY
struct __attribute__((visibility("default"))) PeakPrinter { struct __attribute__((visibility("default"))) PeakPrinter {
~PeakPrinter() { ~PeakPrinter() {
printf("--- skip_list ---\n");
printf("malloc bytes: %g\n", double(mallocBytes)); printf("malloc bytes: %g\n", double(mallocBytes));
printf("Peak malloc bytes: %g\n", double(peakMallocBytes)); printf("Peak malloc bytes: %g\n", double(peakMallocBytes));
} }

View File

@@ -4,4 +4,5 @@ _bzero
_free _free
_malloc _malloc
_memcpy _memcpy
_memmove _memmove
dyld_stub_binder

View File

@@ -4,22 +4,6 @@ import os
from typing import Optional from typing import Optional
_lib = None
for f in (
os.path.dirname(__file__) + "/build/radix_tree/libconflict-set.so.0",
os.path.dirname(__file__) + "/build/radix_tree/libconflict-set.0.dylib",
):
try:
_lib = ctypes.cdll.LoadLibrary(f)
except:
pass
if _lib is None:
import sys
print("Could not find libconflict-set", file=sys.stderr)
sys.exit(1)
class _Key(ctypes.Structure): class _Key(ctypes.Structure):
_fields_ = [("p", ctypes.POINTER(ctypes.c_ubyte)), ("len", ctypes.c_int)] _fields_ = [("p", ctypes.POINTER(ctypes.c_ubyte)), ("len", ctypes.c_int)]
@@ -37,28 +21,6 @@ class WriteRange(ctypes.Structure):
_fields_ = [("begin", _Key), ("end", _Key)] _fields_ = [("begin", _Key), ("end", _Key)]
_lib.ConflictSet_create.argtypes = (ctypes.c_int64,)
_lib.ConflictSet_create.restype = ctypes.c_void_p
_lib.ConflictSet_check.argtypes = (
ctypes.c_void_p,
ctypes.POINTER(ReadRange),
ctypes.POINTER(ctypes.c_int),
ctypes.c_int,
)
_lib.ConflictSet_addWrites.argtypes = (
ctypes.c_void_p,
ctypes.POINTER(WriteRange),
ctypes.c_int,
ctypes.c_int64,
)
_lib.ConflictSet_setOldestVersion.argtypes = (ctypes.c_void_p, ctypes.c_int64)
_lib.ConflictSet_destroy.argtypes = (ctypes.c_void_p,)
class Result(enum.Enum): class Result(enum.Enum):
COMMIT = 0 COMMIT = 0
CONFLICT = 1 CONFLICT = 1
@@ -66,55 +28,109 @@ class Result(enum.Enum):
def write(begin: bytes, end: Optional[bytes] = None) -> WriteRange: def write(begin: bytes, end: Optional[bytes] = None) -> WriteRange:
b = (ctypes.c_ubyte * len(begin))() b = (ctypes.c_ubyte * len(begin)).from_buffer(bytearray(begin))
b.value = begin
if end is None: if end is None:
e = (ctypes.c_ubyte * 0)() e = (ctypes.c_ubyte * 0)()
e.value = b""
else: else:
e = (ctypes.c_ubyte * len(end))() e = (ctypes.c_ubyte * len(end)).from_buffer(bytearray(end))
e.value = end
return WriteRange(_Key(b, len(b)), _Key(e, len(e))) return WriteRange(_Key(b, len(b)), _Key(e, len(e)))
def read(version: int, begin: bytes, end: Optional[bytes] = None) -> ReadRange: def read(version: int, begin: bytes, end: Optional[bytes] = None) -> ReadRange:
b = (ctypes.c_ubyte * len(begin))() b = (ctypes.c_ubyte * len(begin)).from_buffer(bytearray(begin))
b.value = begin
if end is None: if end is None:
e = (ctypes.c_ubyte * 0)() e = (ctypes.c_ubyte * 0)()
e.value = b""
else: else:
e = (ctypes.c_ubyte * len(end))() e = (ctypes.c_ubyte * len(end)).from_buffer(bytearray(end))
e.value = end
return ReadRange(_Key(b, len(b)), _Key(e, len(e)), version) return ReadRange(_Key(b, len(b)), _Key(e, len(e)), version)
class ConflictSet: class ConflictSet:
def __init__(self, version: int = 0) -> None: def __init__(
self.p = _lib.ConflictSet_create(version) self,
version: int = 0,
build_dir: Optional[str] = None,
implementation: Optional[str] = None,
) -> None:
self._lib = None
if build_dir is None:
build_dir = os.path.dirname(__file__) + "/build"
if implementation is None:
implementation = "radix_tree"
for f in (
build_dir + "/" + implementation + "/libconflict-set.so.0",
os.path.dirname(__file__)
+ "/build/"
+ implementation
+ "/libconflict-set.0.dylib",
):
try:
self._lib = ctypes.cdll.LoadLibrary(f)
except:
pass
if self._lib is None:
import sys
print(
"Could not find libconflict-set implementation " + implementation,
file=sys.stderr,
)
sys.exit(1)
self._lib.ConflictSet_create.argtypes = (ctypes.c_int64,)
self._lib.ConflictSet_create.restype = ctypes.c_void_p
self._lib.ConflictSet_check.argtypes = (
ctypes.c_void_p,
ctypes.POINTER(ReadRange),
ctypes.POINTER(ctypes.c_int),
ctypes.c_int,
)
self._lib.ConflictSet_addWrites.argtypes = (
ctypes.c_void_p,
ctypes.POINTER(WriteRange),
ctypes.c_int,
ctypes.c_int64,
)
self._lib.ConflictSet_setOldestVersion.argtypes = (
ctypes.c_void_p,
ctypes.c_int64,
)
self._lib.ConflictSet_destroy.argtypes = (ctypes.c_void_p,)
self._lib.ConflictSet_getBytes.argtypes = (ctypes.c_void_p,)
self._lib.ConflictSet_getBytes.restype = ctypes.c_int64
self.p = self._lib.ConflictSet_create(version)
def addWrites(self, version: int, *writes: WriteRange): def addWrites(self, version: int, *writes: WriteRange):
_lib.ConflictSet_addWrites( self._lib.ConflictSet_addWrites(
self.p, (WriteRange * len(writes))(*writes), len(writes), version self.p, (WriteRange * len(writes))(*writes), len(writes), version
) )
def check(self, *reads: ReadRange) -> list[Result]: def check(self, *reads: ReadRange) -> list[Result]:
r = (ctypes.c_int * len(reads))() r = (ctypes.c_int * len(reads))()
_lib.ConflictSet_check(self.p, *reads, r, 1) self._lib.ConflictSet_check(self.p, *reads, r, 1)
return [Result(x) for x in r] return [Result(x) for x in r]
def setOldestVersion(self, version: int) -> None: def setOldestVersion(self, version: int) -> None:
_lib.ConflictSet_setOldestVersion(self.p, version) self._lib.ConflictSet_setOldestVersion(self.p, version)
def getBytes(self) -> int:
return self._lib.ConflictSet_getBytes(self.p)
def __enter__(self): def __enter__(self):
return self return self
def close(self) -> None: def close(self) -> None:
if self.p is not None: if self.p is not None:
_lib.ConflictSet_destroy(self.p) self._lib.ConflictSet_destroy(self.p)
self.p = None self.p = None
def __exit__(self, exception_type, exception_value, exception_traceback): def __exit__(self, exception_type, exception_value, exception_traceback):
if self.p is not None: self.close()
_lib.ConflictSet_destroy(self.p)
self.p = None

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